Detection of genes encoding ompW and ctxA of Vibrio cholerae isolated from shrimp and shellfish at Kedonganan fish market, Bali-Indonesia

Penulis

  • Rian Ka Praja Alumnus of Master Program in Biomedicine, Faculty of Medicine, Udayana University
  • I Dewa Made Sukrama Department of Clinical Microbiology, Faculty of Medicine, Udayana University
  • Ni Nengah Dwi Fatmawati Department of Clinical Microbiology, Faculty of Medicine, Udayana University

DOI:

https://doi.org/10.30649/obj.v2i1.23

Kata Kunci:

food borne disease, Vibrio cholerae, ompW gene, ctxA gene, dup;ex Polymerase Chain Reaction (d-PCR)

Abstrak

Contamination of pathogenic bacteria in food can lead to the emergence of
foodborne disease. One of foodborne disease which often occurs in some
developing countries such as Africa, Southeast Asia, and Latin America is cholera
which is caused by Vibrio cholerae. The disease is transmitted through beverages
and food, especially contaminated seafood. V. cholerae has several virulence factors
including the outer membrane protein W (ompW) and cholerae toxin (ctx).The ompW
acts as a protective barrier and can also be used as a marker specific species of V.
cholerae and cholerae toxin is an enterotoxin responsible for the incidence of
diarrhea in a cholera outbreak produced by pathogenic V. cholerae. This study was
an observational study to determine the level of contamination of V. cholerae by
detecting the outer membrane protein W (ompW) and cholerae toxin subunit A (ctxA)
gene of V. cholerae in shrimp and shellfish sold at Kedonganan fish market.
Samples were taken using total sampling technique and obtained 24 samples
consisting of 14 shrimp samples and 10 shellfish samples. Samples were examined
using culture methods and biochemical tests, and then further tested using Duplex
Polymerase Chain Reaction (dPCR) to detect ompW and ctxA gene. The dPCR
assay results showed 8 out of 14 (57.1%) samples from shrimp and 1 out of 10
(10%) samples from the shellfish positive carried ompW gene, and found no positive
samples carrying the ctxA gene in samples derived from shrimp and shellfish. Chi
square test analysis results indicated contamination of V. cholerae in shrimp was
higher than shellfish based on ompW gene (p<0.05). It can be concluded that the
shrimp and shellfish at Kedonganan fish market are contaminated by V. cholerae.
Further research is needed to detect the virulence factors besides ompW and ctxA of
V. cholerae in seafood.

Referensi

Adeleye, I.A., Daniels, F.V. and Enyinnia, V.A. 2010. Characterization and

Pathogenicity of Vibrio Spp. Contaminating Seafoods In Lagos, Nigeria.

Internet Journal of Food Safety.12: 1-9

Alizadeh, J., Ranjbar, R., Kamali, M., Farhadi, N., Davari, A. and Sadeghifard, N.

Cloning of Vibrio cholerae outer membrane protein W in Pichia pastoris.

Iran J Microbiol. 5(3): 252–8.

Amizar, R. 2011. Karakterisasi Molekuler dari V. parahaemolyticus dan V. cholerae

yang Diisolasi dari Seafood (Udang, Kerang dan Kepiting) Asal Kota Padang,

Sumatera Barat dan Muara Angke, Jakarta Utara. Program Pascasarjana

Universitas Andalas, Padang.

Ananta, I.P.W.S., Wijaya, I.G.M., Dhinarananta, I.G.P., Yuniadi, P.A. dan

Hendrayana, M.A. 2013. Identifikasi Serotipe Bakteri Vibrio cholerae

Terisolasi dari Es Bahan Pengawet Ikan yang digunakan oleh Pedagang Hasil

Laut Pasar Modern dan Pasar Tradisional di Kota Denpasar. E-Jurnal Medika

Udayana. 2(6): 971-986.

Angeliya. L. dan Kurdiwa, R.R. 2013. Identifikasi Campylobacter jejuni

menggunakan Polymerase Chain Reaction. Jurnal Sain Veteriner. 31(2): 186-

Blake, P.A., Allegra, D.T., Synder, J.D., Barrett, T.J., McFarland, L., Caraway, C.T.,

Feeley, J.C., Craig, J.P., Lee, J.V., Puhr, N.D. and Fieldman, R.A. 1980.

Cholera - a possible epidemic focus in the United States. N. Engl. J. Med.

: 305- 309.

Borroto, R.J. 1997. Ecology of Vibrio cholerae serogroup O1 in aquatic

environments. Pan Am J Public Health. 2(5): 328-333.

Centers for Disease Control and Prevention (CDC). 2010. Laboratory Methods for

the Diagnosis of Vibrio cholerae. [cited October 27th, 2017] Available from:

URL: www.cdc.gov/cholera/pdf/laboratory-methods-for-the-diagnosis-of-vibriocholerae-chapter-6.pdf

Dalusi, L., Saarenhaemo, J., Lyimo, T.J. and Lugomela, C. 2015. Genetic

relationship between clinical and environmental Vibrio cholerae isolates in

Tanzania: A comparison using repetitive extragenic palindromic (REP) and

enterobacterial repetitive intergenic consensus (ERIC) fingerprinting

approach. African Journal of Microbiology Research. 9(7): 455-462.

de Menezes, F.G.R., Neves, S.D.S., de Sousa, O.V., Vila-Nova, C.M.V.M.,

Maggioni, R., Theophilo, G.N.D., Hofer, E. and Vieira, R.H.S.D.F. 2014.

Detection of Virulence Genes in Environmental Strains of Vibrio cholerae from

Estuaries in Northeastern Brazil. Rev. Inst. Med. Trop. 56(5): 427-43.

Dziejman, M., Balon, E., Byod, D., Fraser, C.M., Heidelberg, J.F. and Mekalanos,

J.J. 2002. Comparative Genomic Analysis of Vibrio cholerae Genes that

Correlate With Cholera Endemic and Pandemic Diseases. Proc Natl Acad Sci

USA. 99(2): 1556-1561.

Faruque, S.H.M., Albert, M.J. and Mekalanos, J.J. 1998. Epidemiology, Genetics,

and Ecology of Toxigenic Vibrio cholerae. Microbiology and Molecular Biology

Reviews. 62(4): 1301-1314.

Gooday, G.W., Prasser, J.L., Hillman, K. and Cross, M.G. 1991. Mineralization of

chitin in an estuarine sediment: the importance of the chitosan pathway.

Biochem. Syst. Ecol. 19: 395-400.

Hariyanto, D.S.T., Mahardika, I G.N.K. dan Wandia, I N. 2015. Keragaman Spesies

Ikan Tuna di Pasar Ikan Kedonganan Bali dengan Analisis Sekuen Kontrol

Daerah Mitokondria DNA. Jurnal Veteriner. 16(3): 416-422.

Hill, V.R., Cohen, N., Kahler, A.M., Jones, J.L., Bopp, C.A., Marano, N., Tarr, C.L.,

Garrett, N.M., Boncy, J., Henry, A., Gómez, G.A., Wellman, M., Curtis, M.,

Freeman, M.M., Turnsek, M., Benner Jr, R.A., Dahourou, G., Espey, D.,

DePaola, A., Tappero, J.W., Handzel, T. and Tauxe, R.V. 2011. Toxigenic

Vibrio cholerae O1 in Water and Seafood, Haiti. Emerging Infectious

Diseases. 17(11): 2147-2150.

Huq, A., Haley, B.J., Taviani, E., Chen, A., Hasan, N.A. and Colwell, R.R. 2012.

Detection, Isolation, and Identification of Vibrio cholerae from the

Environment. Curr Protoc Microbiol. Chapter: Unit6A.5.

doi:10.1002/9780471729259.mc06a05s26.

Jones, J.L., Lüdeke, C.H.M., Bowers, J.C., Banick, K.D.R., Carey, D.H. and

Hastback, W. 2014. Abundance of Vibrio cholerae, V. vulnificus, and V.

parahaemolyticus in Oysters (Crassostrea virginica) and Clams (Mercenaria

mercenaria) from Long Island Sound. Appl. Environ. Microbiol. 80(24): 7667-

Khariri. 2012. Karakterisasi Gen ctx Isolat Vibrio cholerae dari Penderita dan Sumber

Air Minum KLB Diare di Bogor Tahun 2009 (Laporan Akhir Penelitian). Pusat

Biomedis dan Teknologi Dasar Kesehatan, Badan Penelitian dan

Pengembangan Kesehatan Kementerian Kesehatan RI.

Kharirie. 2013. Diagnosa Vibrio cholerae dengan Metode Kultur dan Polimerase

Chain Reaction (PCR) pada Sampel Sumber Air Minum. Jurnal Biotek

Medisiana Indonesia. 2(2): 51-58.

Kirn, T.J., Jude, B.A. and Taylor, R.K. 2005. A colonization factor links Vibrio

cholerae environmental survival and human infection. Nature. 438: 863-866.

Koralage, M.S.G., Alter, T., Zessin, K.H., Pichpol, D., Huehn, S. and Strauch, E.

Prevalence and Molecular Characteristics of Vibrio spp. Isolated from

Preharvest Shrimp of the North Western Province of Sri Lanka. Journal of

Food Protection. 75(10): 1846-1850.

Lesmana, M. 2004. Perkembangan mutakhir infeksi kolera. J Kedokter Trisakti.

(3): 101-09.

Lin, J., Huang, S. and Zhang, Q. 2002. Outer membrane proteins: key players for

bacterial adaptation in host niches. Microbes Infect. 4: 325–331.

Madigan, M.T., John, M.M., Kelly, S.B., Daneil, H.B. and David, A.S. 2015. Brock

Biology of Microorganisms. 14th Edition. Pearson.

Maheshwari, M., Krishnaiah, N. and Ramana, D.B.V. 2011b. Evaluation of

Polymerase Chain Reaction for the detection of Vibrio cholerae in

Contaminants. Annals of Biological Research. 2(4): 212-217.

Maheshwari, M., Nelapati, K. and Kiranmayi, B. 2011a. Vibrio cholerae - A Review.

Veterinary World. 4(9): 423-428.

Markov, E.Y., Kulikalova,, E. S., Urbanovich, L.Y., Vishnyakov, V.S. and

Balakhonov, S.V. 2015. Chitin and Products of Its Hydrolysis in Vibrio

cholerae Ecology. Biochemistry (Moscow). 80(9): 1109-1116.

Nandi, B., Nandy, R.K., Nair, G.B., Shimada, T., Mukhopadhyay, S. and Ghose, A.C.

Rapid Method for Species-Specific Identification of Vibrio cholerae

Using Primers Targeted to the Gene of Outer Membrane Protein OmpW. J.

Clin. Microbiol. 38(11): 4145–4151.

Narwati. 2011. Detection of Cholera Toxin-Producing Vibrio cholerae Aquatic

Isolates in Kalimas River-Surabaya. Folia Medica Indonesiana. 47(2): 94-101.

Nishibori T., de Vries, G.C., Rahardjo, D., Wasito, E.B., De, I., Kinoshita, S.,

Hayashi, Y., Hotta, H., Kawabata, M., Shirakawa, T., Iijima, Y. and Osawa, R.

Phenotypic and Genotypic Characterization of Vibrio cholerae Clinically

Isolated in Surabaya. Indonesia. Jpn. J. Infect. Dis. 64(1): 7-12.

Olaniran, A.O., Naicker, K. and Pillay, B. 2011. Toxigenic Escherichia coli and Vibrio

cholerae: Classification, pathogenesis and virulence Determinants.

Biotechnology and Molecular Biology Review. 6(4): 94-100.

Onifade, T.J.M., Hutchinson, R., Zile, K.V., Bodager, D., Baker, R. and Blackmore,

C. 2011. Toxin producing Vibrio cholerae O75 outbreak, United States, March

to April 2011. Euro Surveill. 16(20): 1-3.

Pal, P. 2014. Role of cholera toxin in Vibrio cholerae infection in humans - A Review.

International Letters of Natural Science. 22: 22-32.

Praja, R.K., Sukrama, ID.M., Fatmawati, N.N.D. dan Hidayati, W. 2016. Optimasi

Duplex PCR untuk Deteksi Simultan Gen Penyandi Faktor Virulensi ompW

dan ctxA Vibrio cholerae. Indonesia Medicus Veterinus. 5(5): 438-445.

Rajpara, N., Vinothkumar, K., Mohanty, P., Singh, A.K., Singh, R., Sinha, R., Nag,

D., Koley, H. and Bhardwaj, A.K. 2013. Synergistic Effect of Various Virulence

Factors Leading to High Toxicity of Environmental V. cholerae Non-O1/NonO139 Isolates Lacking ctx Gene: Comparative Study with Clinical Strains.

PLOS ONE. 8(9) e76200; 1-11.

Ramazanzadeh, R., Rouhi, S., Shakib, P., Shahbazi, B., Bidarpour, F. and Karimi,

M. 2015. Molecular Characterization of Vibrio cholerae Isolated from Clinical

Samples in Kurdistan Province, Iran. Jundishapur J Microbiol. 8 (5): 1-6.

Ryan, K.J. and Ray, C.G. 2004. Sherris Medical Microbiology: An Introduction to

Infectious Disease 4th Edition. The McGraw-Hill Companies.

Sathiyamurthy, K., Baskaran, A. and Kumar, S.D. 2013. Prevalence of Vibrio

cholerae and Other Vibrios from Environmental and Seafood Sources, Tamil

Nadu, India. British Microbiology Research Journal. 3(4): 538-549.

Sikora, A.E. 2013. Proteins Secreted via the Type II Secretion System: Smart

Strategies of Vibrio cholerae to Maintain Fitness in Different Ecological

Niches. PLOS Pathogens. 9(2): 1-4.

Sousa, O.V.D., Vieira, R.H.S.D.F., de Menezes, F.G.R., Reis, C.M.F.D. and Hofer,

E. 2004. Detection of Vibrio parahaemolyticus and Vibrio cholerae in Oyster,

Crassostrea rhizophorae, Collected from a Natural Nursery In The Cocó River

Estuary, Fortaleza, Ceará, Brazil. Rev. Inst. Med. Trop. S. Paulo. 46(2): 59-

Tamrakar, A.K., Jain, M., Goel, A.K., Kamboj, D.V. and Singh, L. 2009.

Characterization of Vibrio cholerae from deep ground water in a cholera

endemic area in Central India. Indian J Microbiol. 49(3): 271–275.

Traoré, O., Martikainen, O., Siitonen, A., Traoré, A.S., Barro, N. and Haukka, K.

Occurrence of Vibrio cholerae in fish and water from a reservoir and a

neighboring channel in Ouagadougou, Burkina Faso. J Infect Dev Ctries.

(10): 1334-1338.

Vengadesh, L., Son, R. and Kqueen, Y.C. 2012. Molecular quantitation and

characterization of Vibrio cholerae from different seafood obtained from

wetmarket and supermarket. International Food Research Journal. 19(1): 45-

Waturangi, D.E., Wennars, M., Suhartono, M.X. and Wijaya, Y.F. 2013. Edible ice in

Jakarta, Indonesia, is contaminated with multidrug-resistant Vibrio cholerae

with virulence potential. Journal of Medical Microbiology. 62: 352–359.

Widyastana, I W.Y., Kawuri, R. dan Dalem, A.A.G.R. 2015. Keberadaan Bakteri

Patogen Vibrio cholerae pada Beberapa Hasil Perikanan yang Dijual di Pasar

Tradisional Kota Denpasar. Jurnal Metamorfosa. 2(1): 16-22.

Wijaya, P.I.G.M., Yuniadi, P.A., Ananta, I.P.W.S., Dhinarananta, I.G.P. dan

Hendrayana, M.A. 2013. Deteksi Serotipe Bakteri Vibrio cholerae O1 pada

Sampel Es Pengawet Hasil Laut di Pasar Ikan Kedonganan, Kuta, Bali. EJurnal Medika Udayana. 2(9): 1559-1571.

Xibing, L., Wang, L.X. and Roseman, S. 2007. The chitin catabolic cascade in the

marine bacterium Vibrio cholerae: characterization of a unique chitin

oligosaccharide deacetylase. Glycobiology. 17: 1377–1387

Diterbitkan

2019-01-05

Cara Mengutip

Praja, R. K., Sukrama, I. D. M., & Fatmawati, N. N. D. (2019). Detection of genes encoding ompW and ctxA of Vibrio cholerae isolated from shrimp and shellfish at Kedonganan fish market, Bali-Indonesia. Oceana Biomedicina Journal, 2(1), 1–14. https://doi.org/10.30649/obj.v2i1.23